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How come so many chapters have unknown primarchs ?
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Yea, Belisarius Cawl has stable gene-seeds for all of the Primarchs that he is using to make the Primaris Marines, though he's under orders to only use Loyalist Primarch gene-seeds.
Very few Chapters have a complete stable gene-seed, which leads to a lot of the various quirks. And even the application of the gene-seed isn't consistent which changes things even more. Blood Angels and Space Wolves are supposed to have severe genetic instability for example.