No One Lives Forever (and 2)
It's also rare to have a female protagonist in an FPS.
A gaming community free from the hype and oversaturation of current releases, catering to gamers who wait at least 12 months after release to play a game. Whether it's price, waiting for bugs/issues to be patched, DLC to be released, don't meet the system requirements, or just haven't had the time to keep up with the latest releases.
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No One Lives Forever (and 2)
It's also rare to have a female protagonist in an FPS.
How in the world did y'all miss Silent Hill 3? It's October, and there are even other horror games mentioned. No excuse! Tsk tsk.
If you accept games where you fully create the character, you've got a ton of RPGs. Baldur's gate, elder scrolls, arcanum, fallout.
Eien no Filena on the SNES/SFC (it was Japan-only but it's been fan-translated).
Not only is the protagonist a woman - that fact is repeatedly plot-relevant.
Wet is a fun game if you can handle the loading screens.
Cult: Heretic Kingdoms
Fantastic RPG game, with a badass female protagonist.
Super Hang-On had a female protagonist but you only found out if you beat the hardest arcade mode
I'll recommend a few from different genres:
Ms. Pacman :)
Final Fantasy 6. There are technically several protagonists, but the one with the better claim to "main protagonist" is a woman.
Also, Heaven's Vault isn't an old game, but it's not very well known or talked about, so I'll throw it in anyway.
Most of my suggestions were already mentioned, but PN03 & darkened skye come to mind.
Pedantry aside, if you count the option of selecting a female character, trickstyle, borderlands, super mario bros 2, vigilante 8 second offense, tony hawk 3 (4, underground and probably any in this series but I haven't played them lol)
I don't think anyone has mentioned this yet.
Venetica
A roleplaying game with a female hero and an interesting story:
https://store.steampowered.com/app/338140/Venetica__Gold_Edition/
another classic i totally forgot existed, thanks for reminding me
One of my top 3 JRPGs, Star Ocean: The Second Story, has a remake coming out early November. In the beginning of the game, you get the choice to play as one of the main characters, a male or a female, each of whom has their own story arc and exclusive party members that can be found during the playthrough.